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 brain development


Why are most people right-handed?

Popular Science

Why are most people right-handed? A mix of biology, environment, and evolution helps explain our rightie-dominated world. Around 85 to 90 percent of people are right-handed. Breakthroughs, discoveries, and DIY tips sent every weekday. Roughly 85 to 90 percent of people are right-handed, while just 10 to 15 percent are left-handed, and a small percentage are ambidextrous.


Predicting Brain Morphogenesis via Physics-Transfer Learning

Zhao, Yingjie, Song, Yicheng, Xu, Fan, Xu, Zhiping

arXiv.org Artificial Intelligence

Brain morphology is shaped by genetic and mechanical factors and is linked to biological development and diseases. Its fractal-like features, regional anisotropy, and complex curvature distributions hinder quantitative insights in medical inspections. Recognizing that the underlying elastic instability and bifurcation share the same physics as simple geometries such as spheres and ellipses, we developed a physics-transfer learning framework to address the geometrical complexity. To overcome the challenge of data scarcity, we constructed a digital library of high-fidelity continuum mechanics modeling that both describes and predicts the developmental processes of brain growth and disease. The physics of nonlinear elasticity from simple geometries is embedded into a neural network and applied to brain models. This physics-transfer approach demonstrates remarkable performance in feature characterization and morphogenesis prediction, highlighting the pivotal role of localized deformation in dominating over the background geometry. The data-driven framework also provides a library of reduced-dimensional evolutionary representations that capture the essential physics of the highly folded cerebral cortex. Validation through medical images and domain expertise underscores the deployment of digital-twin technology in comprehending the morphological complexity of the brain.


Our big brains may have evolved because of placental sex hormones

New Scientist

The human brain is one of the most complex objects in the universe – and that complexity may be due to a surge of hormones released by the placenta during pregnancy. While numerous ideas have been proposed to explain human brain evolution, it remains one of our greatest scientific mysteries. One explanation, known as the social brain hypothesis, suggests that our large brains evolved to manage complex social relationships. It posits that navigating large group dynamics requires a certain degree of cognitive ability, pushing social species to develop bigger brains. For instance, other highly sociable animals, such as dolphins and elephants, have relatively large brains too.


'Don't ask what AI can do for us, ask what it is doing to us': are ChatGPT and co harming human intelligence?

The Guardian

Imagine for a moment you are a child in 1941, sitting the common entrance exam for public schools with nothing but a pencil and paper. You read the following: "Write, for no more than a quarter of an hour, about a British author." Today, most of us wouldn't need 15 minutes to ponder such a question. We'd get the answer instantly by turning to AI tools such as Google Gemini, ChatGPT or Siri. Offloading cognitive effort to artificial intelligence has become second nature, but with mounting evidence that human intelligence is declining, some experts fear this impulse is driving the trend.


FetDTIAlign: A Deep Learning Framework for Affine and Deformable Registration of Fetal Brain dMRI

Li, Bo, Zeng, Qi, Warfield, Simon K., Karimi, Davood

arXiv.org Artificial Intelligence

Diffusion MRI (dMRI) provides unique insights into fetal brain microstructure in utero. Longitudinal and cross-sectional fetal dMRI studies can reveal crucial neurodevelopmental changes but require precise spatial alignment across scans and subjects. This is challenging due to low data quality, rapid brain development, and limited anatomical landmarks. Existing registration methods, designed for high-quality adult data, struggle with these complexities. To address this, we introduce FetDTIAlign, a deep learning approach for fetal brain dMRI registration, enabling accurate affine and deformable alignment. FetDTIAlign features a dual-encoder architecture and iterative feature-based inference, reducing the impact of noise and low resolution. It optimizes network configurations and domain-specific features at each registration stage, enhancing both robustness and accuracy. We validated FetDTIAlign on data from 23 to 36 weeks gestation, covering 60 white matter tracts. It consistently outperformed two classical optimization-based methods and a deep learning pipeline, achieving superior anatomical correspondence. Further validation on external data from the Developing Human Connectome Project confirmed its generalizability across acquisition protocols. Our results demonstrate the feasibility of deep learning for fetal brain dMRI registration, providing a more accurate and reliable alternative to classical techniques. By enabling precise cross-subject and tract-specific analyses, FetDTIAlign supports new discoveries in early brain development.


A Single Channel-Based Neonatal Sleep-Wake Classification using Hjorth Parameters and Improved Gradient Boosting

Arslan, Muhammad, Mubeen, Muhammad, Abbasi, Saadullah Farooq, Khan, Muhammad Shahbaz, Boulila, Wadii, Ahmad, Jawad

arXiv.org Artificial Intelligence

Sleep plays a crucial role in neonatal development. Monitoring the sleep patterns in neonates in a Neonatal Intensive Care Unit (NICU) is imperative for understanding the maturation process. While polysomnography (PSG) is considered the best practice for sleep classification, its expense and reliance on human annotation pose challenges. Existing research often relies on multichannel EEG signals; however, concerns arise regarding the vulnerability of neonates and the potential impact on their sleep quality. This paper introduces a novel approach to neonatal sleep stage classification using a single-channel gradient boosting algorithm with Hjorth features. The gradient boosting parameters are fine-tuned using random search cross-validation (randomsearchCV), achieving an accuracy of 82.35% for neonatal sleep-wake classification. Validation is conducted through 5-fold cross-validation. The proposed algorithm not only enhances existing neonatal sleep algorithms but also opens avenues for broader applications.


BOrg: A Brain Organoid-Based Mitosis Dataset for Automatic Analysis of Brain Diseases

Awais, Muhammad, Hameed, Mehaboobathunnisa Sahul, Bhattacharya, Bidisha, Reiner, Orly, Anwer, Rao Muhammad

arXiv.org Artificial Intelligence

Recent advances have enabled the study of human brain development using brain organoids derived from stem cells. Quantifying cellular processes like mitosis in these organoids offers insights into neurodevelopmental disorders, but the manual analysis is time-consuming, and existing datasets lack specific details for brain organoid studies. We introduce BOrg, a dataset designed to study mitotic events in the embryonic development of the brain using confocal microscopy images of brain organoids. BOrg utilizes an efficient annotation pipeline with sparse point annotations and techniques that minimize expert effort, overcoming limitations of standard deep learning approaches on sparse data. We adapt and benchmark state-of-the-art object detection and cell counting models on BOrg for detecting and analyzing mitotic cells across prophase, metaphase, anaphase, and telophase stages. Our results demonstrate these adapted models significantly improve mitosis analysis efficiency and accuracy for brain organoid research compared to existing methods. BOrg facilitates the development of automated tools to quantify statistics like mitosis rates, aiding mechanistic studies of neurodevelopmental processes and disorders. Data and code are available at https://github.com/awaisrauf/borg.


Anatomically Constrained Tractography of the Fetal Brain

Calixto, Camilo, Jaimes, Camilo, Soldatelli, Matheus D., Warfield, Simon K., Gholipour, Ali, Karimi, Davood

arXiv.org Artificial Intelligence

Diffusion-weighted Magnetic Resonance Imaging (dMRI) is increasingly used to study the fetal brain in utero. An important computation enabled by dMRI is streamline tractography, which has unique applications such as tract-specific analysis of the brain white matter and structural connectivity assessment. However, due to the low fetal dMRI data quality and the challenging nature of tractography, existing methods tend to produce highly inaccurate results. They generate many false streamlines while failing to reconstruct streamlines that constitute the major white matter tracts. In this paper, we advocate for anatomically constrained tractography based on an accurate segmentation of the fetal brain tissue directly in the dMRI space. We develop a deep learning method to compute the segmentation automatically. Experiments on independent test data show that this method can accurately segment the fetal brain tissue and drastically improve tractography results. It enables the reconstruction of highly curved tracts such as optic radiations. Importantly, our method infers the tissue segmentation and streamline propagation direction from a diffusion tensor fit to the dMRI data, making it applicable to routine fetal dMRI scans. The proposed method can lead to significant improvements in the accuracy and reproducibility of quantitative assessment of the fetal brain with dMRI.


SynthBrainGrow: Synthetic Diffusion Brain Aging for Longitudinal MRI Data Generation in Young People

Zapaishchykova, Anna, Kann, Benjamin H., Tak, Divyanshu, Ye, Zezhong, Haas-Kogan, Daphne A., Aerts, Hugo J. W. L.

arXiv.org Artificial Intelligence

Synthetic longitudinal brain MRI simulates brain aging and would enable more efficient research on neurodevelopmental and neurodegenerative conditions. Synthetically generated, age-adjusted brain images could serve as valuable alternatives to costly longitudinal imaging acquisitions, serve as internal controls for studies looking at the effects of environmental or therapeutic modifiers on brain development, and allow data augmentation for diverse populations. In this paper, we present a diffusion-based approach called SynthBrainGrow for synthetic brain aging with a two-year step. To validate the feasibility of using synthetically-generated data on downstream tasks, we compared structural volumetrics of two-year-aged brains against syntheticallyaged brain MRI. Results show that SynthBrainGrow can accurately capture substructure volumetrics and simulate structural changes such as ventricle enlargement and cortical thinning. Our approach provides a novel way to generate longitudinal brain datasets from cross-sectional data to enable augmented training and benchmarking of computational tools for analyzing lifespan trajectories. This work signifies an important advance in generative modeling to synthesize realistic longitudinal data with limited lifelong MRI scans. The code is available at XXX. Keywords: Generative Models, Diffusion Probabilistic Models, Neural aging.


Why it pays to be a chatty mum: Babies start learning language BEFORE birth, study finds

Daily Mail - Science & tech

If you're an expectant mother, chatting as much as possible could give your baby a headstart when it comes to learning to talk. That's because new research has found your unborn son or daughter will start learning the language you speak before they're even born. In experiments, researchers discovered heightened activity in the brains of newborns when they heard the language they were exposed to most often in utero. The study didn't look at exactly when babies become receptive to spoken language while they are still in the womb, although it's well known that a foetus starts hearing sounds in the later stages of the second trimester and the start of the third. Therefore, expectant mothers – and fathers too – should not be afraid to chat away, and even talk directly to their baby bump.